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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21068775_21069210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21068775 - 21069210

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CGGGCTCTCACT

Flanking Amino Acid:

KIKREPPEIHRAGLVPSRSC

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

67.3

36.7

Major BPS

72.7

0.56

30.1

Major PPT

74.3

0.55

0.9

65.4

41.1

Minor 5ss

32.2

-2

3.4

43.3

Minor BPS

42.9

-0.4

2.1

56.44

46.2

Associated Gene:

Gene:

FRMD5

Ensembl Gene ID:

ENSAPLG00000007330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040068

21046214 - 21072784

26571

ENSAPLT00000007619

21058537 - 21072784

14248