Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_21077809_21078201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21077809 - 21078201

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTATGTAGC

5'SS Class:

major

3'SS Sequence:

TGGTGTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

GTTTATTTACCT

Flanking Amino Acid:

NKQYFVAAGSVDVRIYDVRY

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

61.8

42.9

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

0.5

1.1

64.5

45.9

Minor 5ss

44.2

-0.6

2.5

54.7

42.7

Minor BPS

62.2

0.46

1.8

81.57

39.9

Associated Gene:

Gene:

WDR76

Ensembl Gene ID:

ENSAPLG00000007086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007380

21075935 - 21084313

8379