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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21095190_21095927_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
21095190 - 21095927

Intron Length:
738

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGTACT

5'SS Class:
major

3'SS Sequence:
GATGTTTACCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
TCCTTTCTAATG

Flanking Amino Acid:
IKLLYVTPEKVCASNRLMAA

Intron Amino Acid Position:
651

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1.1
78.3
35.6

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
63
0.29
1
55.1
44.6

Minor 5ss
40.8
-1
2.4
53.1
43.6

Minor BPS
49.6
-0.1
1.7
54.49
41.9

Associated Gene:

Gene:
BLM

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21085181 - 21102438
17258