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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21110279_21110948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21110279 - 21110948

Intron Length:

670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATAAAT

U12 Branch Point Sequence:

AGATAAATGACC

Flanking Amino Acid:

FVKDVINITQYDEAGMVEAV

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.8

78.8

35.5

Major BPS

56.8

0.17

1.2

65.3

38.6

Major PPT

85.3

0.79

0.7

79.9

25.5

Minor 5ss

35.5

-1.6

2.8

45.4

42.6

Minor BPS

43.2

-0.5

53.43

Associated Gene:

Gene:

CTSH

Ensembl Gene ID:

ENSAPLG00000006722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023606

21107439 - 21115478

8040

ENSAPLT00000006982

21107439 - 21114211

6773