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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21112378_21112941_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21112378 - 21112941

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

ACTTTGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

TGTACGTACACT

Flanking Amino Acid:

AIATGKLLSLAEQQLVDCAQ

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

62.5

42.3

Major BPS

61.6

0.29

1.4

63.4

Major PPT

79.8

0.67

0.9

73.5

36.4

Minor 5ss

-2.3

3.3

35.2

43.3

Minor BPS

43.5

-0.4

2.6

69.13

47.3

Associated Gene:

Gene:

CTSH

Ensembl Gene ID:

ENSAPLG00000006722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023606

21107439 - 21115478

8040

ENSAPLT00000006982

21107439 - 21114211

6773