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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21113322_21113444_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21113322 - 21113444

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTCA

5'SS Class:

strong_major

3'SS Sequence:

GCCTCGCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

GTGACCCGAGCC

Flanking Amino Acid:

KKMYLWREPQNCSATKGNFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

73.7

33.1

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

67.5

0.39

0.9

57.6

38.6

Minor 5ss

33.6

-1.9

41.1

45.4

Minor BPS

43.4

-0.5

54.21

42.8

Associated Gene:

Gene:

CTSH

Ensembl Gene ID:

ENSAPLG00000006722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006982

21107439 - 21114211

6773

ENSAPLT00000023606

21107439 - 21115478

8040