Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_21119705_21121147_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21119705 - 21121147

Intron Length:

1443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

TTGGCCCTAATT

Flanking Amino Acid:

QITLEEVVQMAEGVKAEPFE

Intron Amino Acid Position:

929

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

77.1

0.67

77.9

32.2

Major PPT

74.8

0.56

0.9

73.4

37.1

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

62.9

0.48

1.8

80.38

41.9

Associated Gene:

Gene:

RASGRF1

Ensembl Gene ID:

ENSAPLG00000006206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006489

21115386 - 21134614

19229