Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_21127347_21127789_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21127347 - 21127789

Intron Length:

443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGTGT

5'SS Class:

major

3'SS Sequence:

CTCTGTCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGGGAC

U12 Branch Point Sequence:

GAGCCAGGGACG

Flanking Amino Acid:

LDTSQTFVRQGSLIQVPMSE

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

61.5

45.6

Major BPS

40.6

-0.5

1.3

30.1

33.7

Major PPT

77.7

0.62

0.8

72.2

32.4

Minor 5ss

42.9

-0.8

3.5

65.1

46.1

Minor BPS

35.6

-1.2

2.1

35.85

38.8

Associated Gene:

Gene:

RASGRF1

Ensembl Gene ID:

ENSAPLG00000006206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006489

21115386 - 21134614

19229