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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_21207555_21215032_R

Intron Information:

Intron Rank:
20
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
21207555 - 21215032
Intron Length:
7478

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TGG|GTGAATGAG
5'SS Class:
major
3'SS Sequence:
TCTCTCCCCGCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATCTCAC
U12 Branch Point Sequence:
TGGTCCCCATCT
Flanking Amino Acid:
LEKTRSNINWDLSADLLSLL
Intron Amino Acid Position:
944

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
71.5
0.51
1
61.7
39
Major BPS
76.2
0.65
0.9
77.4
26.5
Major PPT
78.7
0.65
0.7
73.3
24.9
Minor 5ss
25.5
-2.8
3
22.1
37.7
Minor BPS
47.4
-0.1
2.1
70.11
46.1

Associated Gene:

Gene:
ANPEP
Ensembl Gene ID:
ENSAPLG00000005574
Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000005807
21207285 - 21220618
13334