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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21215981_21216058_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
21215981 - 21216058

Intron Length:
78

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAC|GTGAGTCCC

5'SS Class:
major

3'SS Sequence:
CTTTCCCCTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GTCTGAG

U12 Branch Point Sequence:
CTGTCTGAGACG

Flanking Amino Acid:
FQHWQNTDNNTIHPNLRSAI

Intron Amino Acid Position:
780

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.8
0.54
1.3
65.8
40.2

Major BPS
49.8
-0
1.7
51.1
46.3

Major PPT
83.7
0.76
0.7
77.7
24.2

Minor 5ss
31.4
-2.1
2.8
36.4
32.8

Minor BPS
42.5
-0.7
2.3
49.14
45.6

Associated Gene:

Gene:
ANPEP

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21207285 - 21220618
13334

21214670 - 21223642
8973