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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21216167_21216346_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
21216167 - 21216346

Intron Length:
180

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTGAGTGTC

5'SS Class:
major

3'SS Sequence:
CCTCTCCTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GCCCCAT

U12 Branch Point Sequence:
CCAGCCCCAGCC

Flanking Amino Acid:
WTDVPPGLMDQYNEVNAIST

Intron Amino Acid Position:
744

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.2
0.55
1
69.8
34.9

Major BPS
46.8
-0.2
1.4
54.3
42.9

Major PPT
81.7
0.71
0.7
72.7
32.1

Minor 5ss
34
-1.8
3.4
49.1
41.3

Minor BPS
39.3
-0.8
2
43.97
43.6

Associated Gene:

Gene:
ANPEP

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21214670 - 21223642
8973

21207285 - 21220618
13334