About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_21216439_21216581_R

Intron Information:

Intron Rank:
14
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
21216439 - 21216581
Intron Length:
143

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGG|GTGAGCTGT
5'SS Class:
major
3'SS Sequence:
GCCTGCCCTGCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CACTGAC
U12 Branch Point Sequence:
CTGCCCCGCACT
Flanking Amino Acid:
DRSEVFGVMRSYIQKQVKPL
Intron Amino Acid Position:
714

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
75.8
0.61
1
65.8
42.7
Major BPS
61.3
0.28
1
52.7
34.2
Major PPT
69.9
0.45
0.9
61.7
34.9
Minor 5ss
39.7
-1.2
3.1
47.2
48.2
Minor BPS
43.7
-0.4
2.2
63.05
46.5

Associated Gene:

Gene:
ANPEP
Ensembl Gene ID:
ENSAPLG00000005574
Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000024084
21214670 - 21223642
8973
ENSAPLT00000005807
21207285 - 21220618
13334