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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21217818_21217965_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
21217818 - 21217965

Intron Length:
148

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGGACC

5'SS Class:
strong_major

3'SS Sequence:
TGCTCTCCCGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCCCAC

U12 Branch Point Sequence:
CTGCCCACGAGT

Flanking Amino Acid:
TEDVFKEGLQSYLHTYAYGN

Intron Amino Acid Position:
496

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86
0.85
0.9
75.6
33.8

Major BPS
48.9
-0
1.3
58.1
40.4

Major PPT
75
0.56
0.8
69.4
31.3

Minor 5ss
28.1
-2.5
3
34.6
41.4

Minor BPS
41.9
-0.5
2
57.84
45

Associated Gene:

Gene:
ANPEP

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21214670 - 21223642
8973

21207285 - 21220618
13334