Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_21218032_21218149_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21218032 - 21218149

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAGCT

5'SS Class:

major

3'SS Sequence:

GCTGTGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

CGGGTCTCACCT

Flanking Amino Acid:

EVFDSIAYSKGASVLRMLSD

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

68.6

36.5

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

72.8

0.51

65.3

41.1

Minor 5ss

26.2

-2.7

3.5

38.7

46.6

Minor BPS

44.1

-0.3

1.9

55.75

46.6

Associated Gene:

Gene:

ANPEP

Ensembl Gene ID:

ENSAPLG00000005574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024084

21214670 - 21223642

8973

ENSAPLT00000005807

21207285 - 21220618

13334