Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_21256823_21264348_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

21256823 - 21264348

Intron Length:

7526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGGG

5'SS Class:

major

3'SS Sequence:

TCTCCTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

GGCTAACTAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

61.2

43.9

Major BPS

0.45

0.9

67.6

25.3

Major PPT

80.1

0.68

0.7

72.7

32.1

Minor 5ss

34.3

-1.8

3.2

45.8

43.4

Minor BPS

43.2

-0.6

2.1

48.41

43.9

Associated Gene:

Gene:

ZNF710

Ensembl Gene ID:

ENSAPLG00000026218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044185

21256421 - 21269922

13502