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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21272274_21272427_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
21272274 - 21272427

Intron Length:
154

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGGGCAGG

5'SS Class:
major

3'SS Sequence:
CTCTGCGTGCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCACAC

U12 Branch Point Sequence:
TGTCCCACACCT

Flanking Amino Acid:
TITPDEARVEEFKLKKMWKS

Intron Amino Acid Position:
73

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.9
0.56
1.1
59.7
46.7

Major BPS
47.2
-0.1
1
52.2
32.7

Major PPT
64.6
0.33
1.1
57
43.3

Minor 5ss
31.9
-2.1
3.1
39.2
46.3

Minor BPS
47.3
-0.1
2.1
72.08
44

Associated Gene:

Gene:
IDH2

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21269832 - 21273447
3616