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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21286215_21286501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

21286215 - 21286501

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

CCCCTCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

CTCCCAGTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

56.7

42.7

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

78.1

0.63

0.7

72.1

Minor 5ss

33.3

-1.9

35.1

Minor BPS

45.4

-0.2

2.3

65.66

Associated Gene:

Gene:

SEMA4B

Ensembl Gene ID:

ENSAPLG00000010610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011056

21286054 - 21290333

4280