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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21286565_21286655_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

21286565 - 21286655

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCA

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GGTGGCTGAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

67.6

39.4

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

76.3

0.59

0.7

69.3

24.5

Minor 5ss

32.7

-2

39.6

45.9

Minor BPS

42.9

-0.5

2.1

52.92

44.1

Associated Gene:

Gene:

SEMA4B

Ensembl Gene ID:

ENSAPLG00000010610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034134

21286502 - 21291333

4832

ENSAPLT00000011056

21286054 - 21290333

4280