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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21286965_21287082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21286965 - 21287082

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGCAC

5'SS Class:

major

3'SS Sequence:

CTCTCCCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCCCAG

U12 Branch Point Sequence:

GGTCCCAGCAGG

Flanking Amino Acid:

PEYRSTAVMVDGELYAGTVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

64.3

41.8

Major BPS

42.3

-0.4

1.7

52.1

45.2

Major PPT

72.8

0.51

0.9

68.9

31.5

Minor 5ss

31.5

-2.1

3.3

42.7

44.4

Minor BPS

36.4

-1.2

2.2

40.66

42.5

Associated Gene:

Gene:

SEMA4B

Ensembl Gene ID:

ENSAPLG00000010610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034134

21286502 - 21291333

4832

ENSAPLT00000011056

21286054 - 21290333

4280