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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21287460_21287836_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21287460 - 21287836

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGCGCG

5'SS Class:

major

3'SS Sequence:

GGTGCCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CTGCCCTGACCC

Flanking Amino Acid:

IVSRIARVCKGDQGGERVLQ

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

58.4

40.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

60.7

0.24

53.1

41.6

Minor 5ss

37.3

-1.4

3.2

47.1

48.5

Minor BPS

49.6

-0

1.8

60.56

44.4

Associated Gene:

Gene:

SEMA4B

Ensembl Gene ID:

ENSAPLG00000010610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034134

21286502 - 21291333

4832

ENSAPLT00000011056

21286054 - 21290333

4280