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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21288874_21289088_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21288874 - 21289088

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGGGGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

TGCCTCCCCACT

Flanking Amino Acid:

VLQLLLDHDQGLVYAASYAA

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.92

0.9

80.6

25.9

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

0.52

0.8

66.1

28.4

Minor 5ss

18.8

-3.6

4.2

32.2

42.8

Minor BPS

41.1

-0.6

2.1

58.83

Associated Gene:

Gene:

SEMA4B

Ensembl Gene ID:

ENSAPLG00000010610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034134

21286502 - 21291333

4832

ENSAPLT00000011056

21286054 - 21290333

4280