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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21294063_21294613_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21294063 - 21294613

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCACCGGGG

5'SS Class:

weak_major

3'SS Sequence:

AAGTGCCTACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

GCCTCCTCAAGT

Flanking Amino Acid:

EALSEYQVGARFSELLPKEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.9

0.16

1.4

49.2

44.5

Major BPS

73.1

0.58

73.8

32.3

Major PPT

48.9

-0

1.2

43.5

41.7

Minor 5ss

23.2

-3.1

4.4

36.8

47.7

Minor BPS

54.2

0.21

1.9

68.65

47.8

Associated Gene:

Gene:

CIB1

Ensembl Gene ID:

ENSAPLG00000010975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011435

21292635 - 21294673

2039