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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21319003_21319126_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21319003 - 21319126

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

TGTGCCACAGGC

Flanking Amino Acid:

RAYGIGRCAKMCYELWRDLE

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.1

34.7

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

86.8

0.83

0.7

81.2

23.8

Minor 5ss

26.1

-2.7

3.2

42.6

Minor BPS

39.6

-0.8

2.2

52.45

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030449

21272454 - 21323950

51497

ENSAPLT00000022732

21316429 - 21324065

7637

ENSAPLT00000019576

21272454 - 21324065

51612

ENSAPLT00000043817

21316429 - 21325065

8637

ENSAPLT00000003995

21316429 - 21322951

6523

ENSAPLT00000042725

21316429 - 21324065

7637