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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21320736_21320811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21320736 - 21320811

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

CCTGTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TCGGGCTCAGCT

Flanking Amino Acid:

LMCLLSITENGLNPKDYRSL

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

56.6

42.5

Major BPS

0.28

1.1

63.1

35.8

Major PPT

71.2

0.48

0.8

61.7

34.9

Minor 5ss

23.3

-3.1

3.2

25.4

39.4

Minor BPS

-0.4

2.2

59.53

49.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030449

21272454 - 21323950

51497

ENSAPLT00000019576

21272454 - 21324065

51612

ENSAPLT00000003995

21316429 - 21322951

6523

ENSAPLT00000043817

21316429 - 21325065

8637

ENSAPLT00000042725

21316429 - 21324065

7637