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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21322048_21322916_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21322048 - 21322916

Intron Length:

869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCAG

5'SS Class:

major

3'SS Sequence:

GCGGTGCCCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGCCGCTGACCC

Flanking Amino Acid:

LLGGPEFSEAARCWRPRPCR

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

60.5

45.8

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

58.7

0.2

50.2

39.3

Minor 5ss

28.7

-2.4

3.4

37.1

47.5

Minor BPS

43.4

-0.5

2.1

53.35

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003995

21316429 - 21322951

6523