Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_21325090_21325317_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21325090 - 21325317

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTGCTC

5'SS Class:

major

3'SS Sequence:

TTTTCTATGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CTCTCCTCACCT

Flanking Amino Acid:

ENWKLFLELERKTTDPNRFA

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

62.4

42.1

Major BPS

73.8

0.59

1.3

72.8

Major PPT

75.3

0.57

70.8

39.7

Minor 5ss

41.5

-0.9

3.3

59.2

45.5

Minor BPS

57.9

0.33

1.9

75.75

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023057

21322599 - 21329801

7203

ENSAPLT00000004145

21322599 - 21329801

7203