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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21327299_21328545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21327299 - 21328545

Intron Length:

1247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAATTCAC

5'SS Class:

major

3'SS Sequence:

CTTGTGTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CACCCCTCACCC

Flanking Amino Acid:

SVASTYSEFARELSKASRCD

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

65.5

40.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

74.8

0.56

0.9

68.2

37.6

Minor 5ss

35.1

-1.7

2.9

45.5

42.5

Minor BPS

46.7

-0.2

1.9

53.14

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004145

21322599 - 21329801

7203