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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21340945_21341217_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
21340945 - 21341217

Intron Length:
273

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAGGTGCC

5'SS Class:
major

3'SS Sequence:
CTTGTACCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTGTAC

U12 Branch Point Sequence:
TGTGCTTGTACC

Flanking Amino Acid:
VGLCSGHRSRTMAILAELGA

Intron Amino Acid Position:
216

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.5
0.6
1.1
68.7
37.6

Major BPS
49.7
-0
1.4
52.7
42.9

Major PPT
77.5
0.62
0.9
70.5
35.2

Minor 5ss
32.1
-2
3.3
35.7
41.2

Minor BPS
49
-0.1
1.9
63.96
41.6

Associated Gene:

Gene:
UNC45A

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21336123 - 21344244
8122