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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21342022_21342125_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
21342022 - 21342125

Intron Length:
104

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGCCA

5'SS Class:
major

3'SS Sequence:
TGCTCCCCTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGCGAT

U12 Branch Point Sequence:
GGCTTTGCGATC

Flanking Amino Acid:
YAEAEADASKAIEADGRDTK

Intron Amino Acid Position:
70

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.1
0.43
1.1
56.2
42.6

Major BPS
58.6
0.21
1.5
58.2
48.3

Major PPT
76.7
0.6
0.8
69.9
30.9

Minor 5ss
30
-2.3
3.4
40.2
45.3

Minor BPS
38.4
-0.9
1.9
41.76
32.8

Associated Gene:

Gene:
UNC45A

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21336123 - 21344244
8122