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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21348936_21349039_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21348936 - 21349039

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

CTGCGCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GCTGCGCTCACT

Flanking Amino Acid:

CFSGHSGLLQSLRRAGEERE

Intron Amino Acid Position:

743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

1.01

0.9

80.1

34.5

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

69.9

0.45

0.9

62.1

34.8

Minor 5ss

29.3

-2.4

3.8

40.7

45.3

Minor BPS

40.4

-0.6

2.6

60.76

48.5

Associated Gene:

Gene:

MAN2A2

Ensembl Gene ID:

ENSAPLG00000005234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030508

21329752 - 21353962

24211

ENSAPLT00000047288

21346159 - 21353962

7804

ENSAPLT00000023483

21344912 - 21353962

9051

ENSAPLT00000044778

21344912 - 21353962

9051

ENSAPLT00000021092

21344912 - 21353962

9051

ENSAPLT00000041921

21329752 - 21353962

24211

ENSAPLT00000005439

21346316 - 21353962

7647

ENSAPLT00000039999

21344912 - 21353962

9051

ENSAPLT00000048514

21330011 - 21353962

23952