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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21349277_21349541_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21349277 - 21349541

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGTG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

AAGCCCTCAGTC

Flanking Amino Acid:

ATNVVPDVYQVSVLARLPAL

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

69.5

41.1

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

68.2

0.41

0.9

61.5

34.9

Minor 5ss

38.9

-1.2

3.6

54.5

49.7

Minor BPS

46.5

-0.2

1.7

52.17

38.9

Associated Gene:

Gene:

MAN2A2

Ensembl Gene ID:

ENSAPLG00000005234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023483

21344912 - 21353962

9051

ENSAPLT00000044778

21344912 - 21353962

9051

ENSAPLT00000021092

21344912 - 21353962

9051

ENSAPLT00000041921

21329752 - 21353962

24211

ENSAPLT00000005439

21346316 - 21353962

7647

ENSAPLT00000039999

21344912 - 21353962

9051

ENSAPLT00000048514

21330011 - 21353962

23952

ENSAPLT00000030508

21329752 - 21353962

24211

ENSAPLT00000047288

21346159 - 21353962

7804