Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_21362372_21362453_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21362372 - 21362453

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTGAGCAGG

5'SS Class:

weak_major

3'SS Sequence:

ACATCTCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACACAT

U12 Branch Point Sequence:

GCCCACCCAACA

Flanking Amino Acid:

NELTVESVQHSLTSIEEELA

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.3

52.3

46.1

Major BPS

57.6

0.19

64.6

32.2

Major PPT

76.5

0.6

0.9

69.8

35.7

Minor 5ss

34.9

-1.7

2.9

40.3

40.2

Minor BPS

41.6

-0.6

1.9

47.96

41.5

Associated Gene:

Gene:

FES

Ensembl Gene ID:

ENSAPLG00000005644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034727

21359029 - 21364353

5325

ENSAPLT00000022246

21359029 - 21365055

6027

ENSAPLT00000020360

21359029 - 21364353

5325

ENSAPLT00000005856

21359029 - 21365055

6027