Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_21363640_21363720_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21363640 - 21363720

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGCAGG

5'SS Class:

major

3'SS Sequence:

CCTCTTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CGCTCCCTGAGG

Flanking Amino Acid:

WQQLSQEYTRTTQQEMEKLK

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.2

54.5

49.7

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

82.3

0.73

0.7

76.6

25.4

Minor 5ss

36.9

-1.5

3.1

39.5

46.2

Minor BPS

45.1

-0.5

47.81

45.6

Associated Gene:

Gene:

FES

Ensembl Gene ID:

ENSAPLG00000005644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022246

21359029 - 21365055

6027

ENSAPLT00000020360

21359029 - 21364353

5325

ENSAPLT00000005856

21359029 - 21365055

6027

ENSAPLT00000005839

21359029 - 21365055

6027

ENSAPLT00000034727

21359029 - 21364353

5325