Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_21364242_21364928_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21364242 - 21364928

Intron Length:

687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGAGGG

5'SS Class:

major

3'SS Sequence:

TGCTGCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

CGCGTCTCAGGC

Flanking Amino Acid:

LRGRDLAARTASSQQDRGAM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.2

52.9

44.5

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

76.2

0.59

0.9

69.4

36.9

Minor 5ss

24.8

-2.9

3.2

30.1

Minor BPS

37.6

-0.9

1.9

40.7

Associated Gene:

Gene:

FES

Ensembl Gene ID:

ENSAPLG00000005644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005839

21359029 - 21365055

6027

ENSAPLT00000022246

21359029 - 21365055

6027

ENSAPLT00000005856

21359029 - 21365055

6027