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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21405079_21405355_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

21405079 - 21405355

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TCCCTGCCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CGGTCCTGACAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.1

43.4

Major BPS

68.9

0.47

59.2

39.1

Major PPT

65.7

0.35

61.2

35.1

Minor 5ss

26.2

-2.7

2.9

22.9

37.3

Minor BPS

44.8

-0.5

1.9

46.17

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033789

21404835 - 21409097

4263

ENSAPLT00000029342

21404835 - 21409000

4166