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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21405475_21405972_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

21405475 - 21405972

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TGTCTTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGGTAT

U12 Branch Point Sequence:

ATTGTCTTCTCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

42.4

-0.4

1.5

35.1

43.5

Major PPT

82.7

0.74

0.8

80.8

31.2

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

41.5

-0.5

3.6

73.32

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033789

21404835 - 21409097

4263

ENSAPLT00000029342

21404835 - 21409000

4166