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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21406134_21406266_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21406134 - 21406266

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCAGG

5'SS Class:

major

3'SS Sequence:

GTCCCCCCAGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

TGTCCCCCCAGG

Flanking Amino Acid:

MRLCLAMTGAAFPGTCW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

61.4

44.7

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

47.3

-0.1

1.6

51.6

32.6

Minor 5ss

33.5

-1.9

2.8

36.6

41.8

Minor BPS

-1

2.3

46.84

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033789

21404835 - 21409097

4263

ENSAPLT00000029342

21404835 - 21409000

4166