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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21406789_21406863_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21406789 - 21406863

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGCAC

U12 Branch Point Sequence:

CACTGCGGGACA

Flanking Amino Acid:

WAGLLAALEEVADLDPTECC

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

45.3

-0.2

1.4

51.4

43.9

Major PPT

73.1

0.52

0.9

68.4

31.7

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

39.1

-0.8

2.4

47.31

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029342

21404835 - 21409000

4166

ENSAPLT00000033789

21404835 - 21409097

4263