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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21407305_21407679_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21407305 - 21407679

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

AGTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGGCAT

U12 Branch Point Sequence:

CAGGCATGAGGC

Flanking Amino Acid:

PAAGGNRLGVKRLALLDFSN

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

45.9

-0.2

1.4

52.7

43.2

Major PPT

84.7

0.78

0.8

81.7

35.4

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

35.6

-1.1

1.9

37.25

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033789

21404835 - 21409097

4263

ENSAPLT00000029342

21404835 - 21409000

4166