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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21407921_21408223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21407921 - 21408223

Intron Length:

303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGGGG

5'SS Class:

major

3'SS Sequence:

TTCTCCTTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TAATCCTCACTC

Flanking Amino Acid:

CPEQHCSAPRDTRSQPSSSS

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

60.1

42.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

80.1

0.68

0.9

80.5

31.5

Minor 5ss

27.2

-2.6

3.7

37.3

47.4

Minor BPS

53.7

0.1

1.8

64.89

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033789

21404835 - 21409097

4263

ENSAPLT00000029342

21404835 - 21409000

4166