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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21408279_21408599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21408279 - 21408599

Intron Length:

321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

CTCGTTGTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAACAA

U12 Branch Point Sequence:

ACAGGGAAAACA

Flanking Amino Acid:

SSLAEIPDYLRKYHTIRSAE

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

79.3

34.5

Major BPS

48.1

-0.1

0.9

53.4

30.8

Major PPT

0.41

1.1

64.2

41.5

Minor 5ss

36.8

-1.5

3.6

57.2

46.9

Minor BPS

31.4

-1.4

2.4

38.64

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029342

21404835 - 21409000

4166

ENSAPLT00000033789

21404835 - 21409097

4263