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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21422426_21423460_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21422426 - 21423460

Intron Length:

1035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGATC

5'SS Class:

strong_major

3'SS Sequence:

GCCCTGTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCAAAT

U12 Branch Point Sequence:

GCTGCCAGCACA

Flanking Amino Acid:

ARDWPDARGIWHNNEKTFLI

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

74.7

35.1

Major BPS

48.8

-0

1.2

55.2

38.9

Major PPT

62.3

0.28

0.9

53.3

36.7

Minor 5ss

31.5

-2.1

3.2

39.8

40.4

Minor BPS

42.3

-0.6

2.2

53.78

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010625

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030708

21421205 - 21429659

8455

ENSAPLT00000011083

21421205 - 21427091

5887