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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21484558_21488125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21484558 - 21488125

Intron Length:

3568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGATCG

5'SS Class:

major

3'SS Sequence:

ATTTCACTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TATGCCACAATT

Flanking Amino Acid:

VVMQDESFPASAKTCGPAKR

Intron Amino Acid Position:

3019

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

59.4

40.4

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

81.3

0.71

0.8

74.1

Minor 5ss

41.2

-1

3.1

58.9

45.1

Minor BPS

52.1

0.14

1.9

74.63

42.1

Associated Gene:

Gene:

MAP1A

Ensembl Gene ID:

ENSAPLG00000027744

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038012

21484112 - 21500540

16429