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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21488265_21489219_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21488265 - 21489219

Intron Length:

955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATGAT

U12 Branch Point Sequence:

TGTTCTCGAACA

Flanking Amino Acid:

GKSQWGENLQVTLIPTHDTE

Intron Amino Acid Position:

3168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

36.6

Major BPS

64.5

0.36

1.1

55.4

40.3

Major PPT

87.1

0.84

0.7

80.8

31.2

Minor 5ss

40.6

-1

2.8

52.4

44.8

Minor BPS

58.7

0.27

1.8

74.1

Associated Gene:

Gene:

MAP1A

Ensembl Gene ID:

ENSAPLG00000027744

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038012

21484112 - 21500540

16429

ENSAPLT00000017784

21488109 - 21539485

51377