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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21489453_21491707_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21489453 - 21491707

Intron Length:

2255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTCCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTTCCAAAG

Flanking Amino Acid:

NLVNGIKTNPASNSPKSSLA

Intron Amino Acid Position:

3090

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.4

37.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

76.2

0.59

78.2

Minor 5ss

-1.9

2.9

37.5

41.1

Minor BPS

47.3

-0.3

61.22

40.6

Associated Gene:

Gene:

MAP1A

Ensembl Gene ID:

ENSAPLG00000027744

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038012

21484112 - 21500540

16429

ENSAPLT00000017784

21488109 - 21539485

51377