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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21503809_21539274_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21503809 - 21539274

Intron Length:

35466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TCTCGTTTAATT

Flanking Amino Acid:

HLAQFSSEVKGQRTLHHRSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

38.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

77.3

0.61

0.8

69.3

36.9

Minor 5ss

37.3

-1.4

2.8

50.6

45.6

Minor BPS

0.42

1.8

76.64

40.8

Associated Gene:

Gene:

MAP1A

Ensembl Gene ID:

ENSAPLG00000027744

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017784

21488109 - 21539485

51377