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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2157078_2158292_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2157078 - 2158292

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAG

U12 Branch Point Sequence:

TGCTCTGTCATT

Flanking Amino Acid:

TIDGIKQVVKENSEDFEMLS

Intron Amino Acid Position:

1428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

63.9

0.35

1.6

72.3

40.4

Major PPT

80.4

0.68

0.9

77.3

35.9

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

46.3

-0.2

2.3

67.55

44.3

Associated Gene:

Gene:

MYO5C

Ensembl Gene ID:

ENSAPLG00000023919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029054

2152638 - 2187132

34495