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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21595524_21595822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21595524 - 21595822

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGTA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

CTCCTTTCAATG

Flanking Amino Acid:

YYTQAGGTLGSFGV*

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

75.2

35.1

Major BPS

76.9

0.67

1.2

31.9

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

32.6

-2

3.7

46.4

48.9

Minor BPS

47.1

-0.3

1.6

47.72

40.6

Associated Gene:

Gene:

TUBGCP4

Ensembl Gene ID:

ENSAPLG00000010724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011226

21595511 - 21616832

21322