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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2160469_2160689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2160469 - 2160689

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAA

U12 Branch Point Sequence:

AGAACAGTAAAA

Flanking Amino Acid:

HEPEGDRTLRRKNEAQNEIN

Intron Amino Acid Position:

1258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.4

34.2

Major BPS

55.1

0.13

1.2

57.3

36.3

Major PPT

77.5

0.62

0.9

69.4

41.7

Minor 5ss

34.4

-1.8

2.8

42.8

Minor BPS

41.7

-0.6

2.2

51.39

Associated Gene:

Gene:

MYO5C

Ensembl Gene ID:

ENSAPLG00000023919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029054

2152638 - 2187132

34495