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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21605599_21608195_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21605599 - 21608195

Intron Length:

2597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GGGTCTCTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

TGCTCTCTATCT

Flanking Amino Acid:

GKQLRELQDLRLIEEENMLA

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

66.1

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

63.1

0.3

1.1

57.3

43.3

Minor 5ss

34.5

-1.8

3.4

44.4

Minor BPS

51.9

0.14

73.15

43.8

Associated Gene:

Gene:

TUBGCP4

Ensembl Gene ID:

ENSAPLG00000010724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011226

21595511 - 21616832

21322